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Registro Completo |
Biblioteca(s): |
Embrapa Amazônia Oriental. |
Data corrente: |
03/11/2022 |
Data da última atualização: |
12/12/2022 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
KAUFFMANN, C. M.; BOARI, A. de J.; SILVA, J. M. F.; BLAWID, R.; NAGATA, T. |
Afiliação: |
CATERYNNE MELO KAUFFMANN, UNIVERSIDADE DE BRASÍLIA; ALESSANDRA DE JESUS BOARI, CPATU; JOÃO MARCOS FAGUNDES SILVA, UNIVERSIDADE DE BRASÍLIA; ROSANA BLAWID, UNIVERSIDADE FEDERAL RURAL DE PERNAMBUCO; TATSUYA NAGATA, UNIVERSIDADE DE BRASÍLIA. |
Título: |
Complete genome sequence of patchouli chlorosis-associated cytorhabdovirus, a new cytorhabdovirus infecting patchouli plants in Brazil. |
Ano de publicação: |
2022 |
Fonte/Imprenta: |
Archives of Virology, v. 167, n. 12, p. 2817-2820, 2022. |
DOI: |
https://doi.org/10.1007/s00705-022-05594-5 |
Idioma: |
Inglês |
Conteúdo: |
A cytorhabdovirus, tentatively named "patchouli chlorosis-associated cytorhabdovirus" (PCaCV), was identified in a patchouli plant, using high-throughput sequencing, and its genome sequence was confirmed by Sanger sequencing. The PCaCV genome consists of 12,913 nucleotides and contains six open reading frames in the order 3'-N-P'-P-P3-M-(G)-L-5'. The glycoprotein gene was found to contain stop codons in the coding frame; hence, this gene is considered defective. PCaCV is most closely related to tomato yellow mottle-associated virus, sharing 61.1% nucleotide sequence identity in the complete genome and 73.9% amino acid sequence identity in the L protein. These data suggest that PCaCV should be considered a new member of the genus Cytorhabdovirus, and the binomial species name "Cytorhabdovirus patchoulii" is proposed. |
Palavras-Chave: |
Patchouli. |
Thesagro: |
Genoma; Vírus. |
Categoria do assunto: |
-- |
Marc: |
LEADER 01523naa a2200217 a 4500 001 2147984 005 2022-12-12 008 2022 bl uuuu u00u1 u #d 024 7 $ahttps://doi.org/10.1007/s00705-022-05594-5$2DOI 100 1 $aKAUFFMANN, C. M. 245 $aComplete genome sequence of patchouli chlorosis-associated cytorhabdovirus, a new cytorhabdovirus infecting patchouli plants in Brazil.$h[electronic resource] 260 $c2022 520 $aA cytorhabdovirus, tentatively named "patchouli chlorosis-associated cytorhabdovirus" (PCaCV), was identified in a patchouli plant, using high-throughput sequencing, and its genome sequence was confirmed by Sanger sequencing. The PCaCV genome consists of 12,913 nucleotides and contains six open reading frames in the order 3'-N-P'-P-P3-M-(G)-L-5'. The glycoprotein gene was found to contain stop codons in the coding frame; hence, this gene is considered defective. PCaCV is most closely related to tomato yellow mottle-associated virus, sharing 61.1% nucleotide sequence identity in the complete genome and 73.9% amino acid sequence identity in the L protein. These data suggest that PCaCV should be considered a new member of the genus Cytorhabdovirus, and the binomial species name "Cytorhabdovirus patchoulii" is proposed. 650 $aGenoma 650 $aVírus 653 $aPatchouli 700 1 $aBOARI, A. de J. 700 1 $aSILVA, J. M. F. 700 1 $aBLAWID, R. 700 1 $aNAGATA, T. 773 $tArchives of Virology$gv. 167, n. 12, p. 2817-2820, 2022.
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Embrapa Amazônia Oriental (CPATU) |
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Registros recuperados : 15 | |
2. | | KAUFFMANN, C. M.; BOARI, A. de J.; SILVA, J. M. F.; BLAWID, R.; NAGATA, T. Complete genome sequence of mimosa mosaic virus, a new sobemovirus infecting Mimosa sensitiva L. Archives of Virology, v. 168, n. 1, Article number 28, Jan. 2023.Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
Biblioteca(s): Embrapa Amazônia Oriental. |
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3. | | KAUFFMANN, C. M.; BOARI, A. de J.; SILVA, J. M. F.; BLAWID, R.; NAGATA, T. Complete genome sequence of patchouli chlorosis-associated cytorhabdovirus, a new cytorhabdovirus infecting patchouli plants in Brazil. Archives of Virology, v. 167, n. 12, p. 2817-2820, 2022.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
Biblioteca(s): Embrapa Amazônia Oriental. |
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4. | | SILVA, J. M. F.; FAJARDO, T. V. M.; AL RWAHNIH, M.; BLAWID, R.; NAGATA, T. Molecular characterization of grapevine enamo-like virus, a novel putative member of the genus enamovirus. Virus Reviews and Research, v. 20, n. 2, p. 27, 2016. (Annals of the XXVII Brazilian Congress of Virology & XI Mercosur Meeting of Virology). Annals of the XXVII Brazilian Congress of Virology & XI Mercosur Meeting of Virology, Pirienópolis, GO, 2016.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Uva e Vinho. |
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5. | | SILVA, J. M. F.; FAJARDO, T. V. M.; AL RWAHNIN, M.; BLAWID, R.; NAGATA, T. Molecular characterization of Grapevine enamolike virus, a novel putative member of the genus Enamovirus. Virus Reviews and Research, n. 20, v. 2, p. 28-29, 2016. (Annals of the XXVII Brazilian Congress of Virology & X Mercosur Meeting of Virology). Annals of the XXVII Brazilian Congress of Virology & X Mercosur Meeting of Virology, Pirenópolis, GO, 2016.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Uva e Vinho. |
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7. | | SILVA, J. M. F; RWAHNIH, M. A.; BLAWID, R.; NAGATA, T.; FAJARDO, T. V. M. Discovery and molecular characterization of a novel enamovirus, Grapevine enamovirus-1. Virus Genes, v.53, n. 4, p. 667-671 [online], 2017.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
Biblioteca(s): Embrapa Uva e Vinho. |
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8. | | SILVA, J. M. F.; BLAWID, R.; NAGATA, T.; FAJARDO, T. V. M. In silico detection of a defective genomic RNA of Grapevine leafroll-associated virus 4 strain 5 in High-Throughput Sequencing data. In:Congress of the International Council for the Study of Virus and Virus-like Diseases of the Grapevine (ICVG), 19., 2018, Santiago, Chile. Anais... santiago, Chile: ICGV, April, 2018. p. 162-163.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Uva e Vinho. |
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10. | | SOUZA, E. B.; NICKEL, O.; NAGATA, T.; SILVA, J. M. F.; FAJARDO, T. V. M.; BARROS, D. R. Recombination events in full genome sequences of apple stem grooving virus. Virus Reviews and Research, v. 20, n. 2, p. 146, 2016. (Annals of the XXVII Brazilian Congress of Virology & XI Mercosur Meeting of Virology). Annals of the XXVII Brazilian Congress of Virology & XI Mercosur Meeting of Virology, Pirienópolis, GO, 2016.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Uva e Vinho. |
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11. | | KAUFFMANN, C. M.; BOARI, A. de J.; SILVA, J. M. F.; BLAWID, R.; KITAJIMA, E. W.; NAGATA, T. Detection, characterization, and occurrence of black pepper virus F in black pepper plants in Brazil. Tropical Plant Pathology, v. 48, n. 3, p. 347-351, 2023.Tipo: Nota Técnica/Nota Científica |
Biblioteca(s): Embrapa Amazônia Oriental. |
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12. | | SILVA, J. M. F.; PEREIRA, B. R. de M.; AI RWAHNÍH, M.; BLAWID, R.; NAGATA, T.; FAJARDO, T. V. M. Discovery and partial characterization of a novel virus, tentatively named Grapevine virgalike virus. In:Congress of the International Council for the Study of Virus and Virus-like Diseases of the Grapevine (ICVG), 19., 2018, Santiago, Chile. Anais... santiago, Chile: ICGV, April, 2018. p. 146-147.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Uva e Vinho. |
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15. | | DUARTE, M. F.; ANDRADE, I. A. de; SILVA, J. M. F.; MELO, F. L. de; MACHADO, A. M.; INOUE-NAGATA, A. K.; NAGATA, T. Metagenomic analyses of plant virus sequences in sewage water for plant viruses monitoring. Tropical Plant Pathology, v. 48, p. 408-416, 2023.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 4 |
Biblioteca(s): Embrapa Hortaliças. |
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Registros recuperados : 15 | |
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Nenhum registro encontrado para a expressão de busca informada. |
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